BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB024B11LP1|AL428173
(984 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1161 1931 0.0
>3x_Contig1161
Length = 5308
Score = 1931 bits (973), Expect = 0.0
Identities = 982/985 (99%), Gaps = 1/985 (0%)
Strand = Plus / Plus
Query: 1 agttgcaataatcatagcaccaccaccttaaaaacaataaaaataaatacagtcgctcgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 agttgcaataatcatagcaccaccaccttaaaaacaataaaaataaatacagtcgctcgt 693
Query: 61 ttgaaatatattttgctttcaatttaactattgaaagaacctgataccaaaaacccaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 ttgaaatatattttgctttcaatttaactattgaaagaacctgataccaaaaacccaaga 753
Query: 121 acgttttctaagcggctttgtctgagaaaacctgaaaaaacctttttgacacatttctgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 754 acgttttctaagcggctttgtctgagaaaacctgaaaaaacctttttgacacatttctgc 813
Query: 181 aggcaaacttcttttgtccctgcattagaaaaaaagaacttttgtgaacacctaaccaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 814 aggcaaacttcttttgtccctgcattagaaaaaaagaacttttgtgaacacctaaccaag 873
Query: 241 gcaaacctaaaacaaaagctacctatggagcaatatcttaacttatccgatgatggcgaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 874 gcaaacctaaaacaaaagctacctatggagcaatatcttaacttatccgatgatggcgaa 933
Query: 301 g-acagcctaatttggatttggaattaaaatccttctttgactttagtcaagattcatca 359
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 934 gcacagcctaatttggatttggaattaaaatccttctttgactttagtcaagattcatca 993
Query: 360 attaaccaagatccttctgcagttggtcccaacaatactgcttattcagaacaggttttt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 994 attaaccaagatccttctgcagttggtcccaacaatactgcttattcagaacaggttttt 1053
Query: 420 cctgaattcacatttgaaactgaatctagcggaaaagagtttcaatttggttctattgcg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1054 cctgaattcacatttgaaactgaatctagcggaaaagagtttcaatttggttctattgcg 1113
Query: 480 gagttgttacaggacacaccaatgagtagagatctagattattccacagctactgagacg 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1114 gagttgttacaggacacaccaatgagtagagatctagattattccacagctactgagacg 1173
Query: 540 tccacgccacatttcacctatatggcagataacttcttggctagtaattacagtttggat 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1174 tccacgccacatttcacctatatggcagataacttcttggctagtaattacagtttggat 1233
Query: 600 garattgctgcgttaccgaatactaatgagcaaattaccattagtaacacaaataataac 659
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1234 gaaattgctgcgttaccgaatactaatgagcaaattaccattagtaacacaaataataac 1293
Query: 660 aaaggtaacttgatgcatttttctgtcggtcaatcgatgttgtgttttaataacgatatt 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1294 aaaggtaacttgatgcatttttctgtcggtcaatcgatgttgtgttttaataacgatatt 1353
Query: 720 tttgacggtagaagggaaagctttgtttccgatactgttactccgattagttccaacaca 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1354 tttgacggtagaagggaaagctttgtttccgatactgttactccgattagttccaacaca 1413
Query: 780 aattcgccaaggagtaattctgtcaataataataaaattaacagaatcaacaacatgagg 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1414 aattcgccaaggagtaattctgtcaataataataaaattaacagaatcaacaacatgagg 1473
Query: 840 gcacagaaacctaataatgtgaggtttagtttcaatcatgtaaattcatctccttttgct 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1474 gcacagaaacctaataatgtgaggtttagtttcaatcatgtaaattcatctccttttgct 1533
Query: 900 gttggtagctcttccagtattgcagaagtctccatggattcgatgtttccaccctcgccc 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1534 gttggtagctcttccagtattgcagaagtctccatggattcgatgtttccaccctcgccc 1593
Query: 960 acgaagacaccaacgaaaatkttgc 984
|||||||||||||||||||| ||||
Sbjct: 1594 acgaagacaccaacgaaaatgttgc 1618
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8841
Number of Sequences: 1807
Number of extensions: 8841
Number of successful extensions: 68
Number of sequences better than 1.0e-20: 1
length of query: 984
length of database: 10,358,551
effective HSP length: 16
effective length of query: 968
effective length of database: 10,329,639
effective search space: 9999090552
effective search space used: 9999090552
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)